package fr.cephb.joperon.core.bio;

/** A sequence on an organism */
public interface GenomicSequence extends DNASequence
	{
	/** @return the organism of this sequence */
	public Organism getOrganism();
	/** @return the chromosome of this sequence */
	public Chromosome getChromosome();
	/** @return the base in 5' of the sequence on the chromosome */
	public int getChromStart();
	/** @return the base in 3' of the sequence on the chromosome */
	public int getChromEnd();
	/** @return the strand of the sequence */
	public Strand getStrand();
	}
